Index: wp-includes/taxonomy.php
===================================================================
--- wp-includes/taxonomy.php	(revision 7519)
+++ wp-includes/taxonomy.php	(working copy)
@@ -34,15 +34,23 @@
  *
  * @uses $wp_taxonomies
  *
- * @param array|string $object_type Name of the type of taxonomy object
+ * @param array|string|object $object Name of the type of taxonomy object, or an object (row from posts)
  * @return array The names of all taxonomy of $object_type.
  */
-function get_object_taxonomies($object_type) {
+function get_object_taxonomies($object) {
 	global $wp_taxonomies;
 
+	if ( is_object($object) ) {
+		if ( $object->post_type == 'attachment' )
+			return get_attachment_taxonomies($object);
+		$object = $object->post_type;
+	}
+
+	$object = (array) $object;
+
 	$taxonomies = array();
 	foreach ( $wp_taxonomies as $taxonomy ) {
-		if ( in_array($object_type, (array) $taxonomy->object_type) )
+		if ( array_intersect($object, (array) $taxonomy->object_type) )
 			$taxonomies[] = $taxonomy->name;
 	}
 
@@ -119,44 +127,51 @@
 }
 
 /**
- * register_taxonomy() - Create or modify a taxonomy object.
+ * register_taxonomy() - Create or modify a taxonomy object. Do not use before init.
  *
  * A simple function for creating or modifying a taxonomy object based on the parameters given.
  * The function will accept an array (third optional parameter), along with strings for the
  * taxonomy name and another string for the object type.
  *
- * The function keeps a default set, allowing for the $args to be optional but allow the other
- * functions to still work. It is possible to overwrite the default set, which contains two
- * keys: hierarchical and update_count_callback.
- *
  * Nothing is returned, so expect error maybe or use is_taxonomy() to check whether taxonomy exists.
  *
  * Optional $args contents:
  * hierarachical - has some defined purpose at other parts of the API and is a boolean value.
  * update_count_callback - works much like a hook, in that it will be called when the count is updated.
+ * rewrite - false to prevent rewrite, or array('slug'=>$slug) to customize permastruct; default will use $taxonomy as slug
+ * query_var - false to prevent queries, or string to customize query var (?$query_var=$term); default will use $taxonomy as query var
  *
  * @package WordPress
  * @subpackage Taxonomy
  * @since 2.3
  * @uses $wp_taxonomies Inserts new taxonomy object into the list
+ * @uses $wp_rewrite Adds rewrite tags and permastructs
+ * @uses $wp Adds query vars
  *
  * @param string $taxonomy Name of taxonomy object
  * @param array|string $object_type Name of the object type for the taxonomy object.
  * @param array|string $args See above description for the two keys values.
  */
 function register_taxonomy( $taxonomy, $object_type, $args = array() ) {
-	global $wp_taxonomies, $wp_rewrite;
+	global $wp_taxonomies, $wp_rewrite, $wp;
 
-	$defaults = array('hierarchical' => false, 'update_count_callback' => '');
+	$defaults = array('hierarchical' => false, 'update_count_callback' => '', 'rewrite' => true, 'query_var' => true);
 	$args = wp_parse_args($args, $defaults);
 
-	if ( !empty( $args['rewrite'] ) ) {
+	if ( false !== $args['query_var'] ) {
+		if ( empty($args['query_var']) )
+			$args['query_var'] = $taxonomy;
+		$args['query_var'] = sanitize_title_with_dashes($args['query_var']);
+		$wp->add_query_var($args['query_var']);
+	}
+
+	if ( false !== $args['rewrite'] ) {
 		if ( !is_array($args['rewrite']) )
 			$args['rewrite'] = array();
 		if ( !isset($args['rewrite']['slug']) )
 			$args['rewrite']['slug'] = sanitize_title_with_dashes($taxonomy);
-		$wp_rewrite->add_rewrite_tag("%$taxonomy%", '([^/]+)', "taxonomy=$taxonomy&term=");
-		$wp_rewrite->add_permastruct("{$args['rewrite']['slug']}/%$taxonomy%");
+		$wp_rewrite->add_rewrite_tag("%$taxonomy%", '([^/]+)', $args['query_var'] ? "{$args['query_var']}=" : "taxonomy=$taxonomy&term=$term");
+		$wp_rewrite->add_permastruct($taxonomy, "{$args['rewrite']['slug']}/%$taxonomy%");
 	}
 
 	$args['name'] = $taxonomy;
@@ -1036,6 +1051,22 @@
 
 	$defaults = array('orderby' => 'name', 'order' => 'ASC', 'fields' => 'all');
 	$args = wp_parse_args( $args, $defaults );
+
+	$terms = array();
+	if ( count($taxonomies) > 1 ) {
+		foreach ( $taxonomies as $index => $taxonomy ) {
+			$t = get_taxonomy($taxonomy);
+			if ( is_array($t->args) && $args != array_merge($args, $t->args) ) {
+				unset($taxonomies[$index]);
+				$terms = array_merge($terms, wp_get_object_terms($object_ids, $taxonomy, array_merge($args, $t->args)));
+			}
+		}
+	} else {
+		$t = get_taxonomy($taxonomies[0]);
+		if ( is_array($t->args) )
+			$args = array_merge($args, $t->args);
+	}
+
 	extract($args, EXTR_SKIP);
 
 	if ( 'count' == $orderby )
@@ -1067,10 +1098,10 @@
 	$query = "SELECT $select_this FROM $wpdb->terms AS t INNER JOIN $wpdb->term_taxonomy AS tt ON tt.term_id = t.term_id INNER JOIN $wpdb->term_relationships AS tr ON tr.term_taxonomy_id = tt.term_taxonomy_id WHERE tt.taxonomy IN ($taxonomies) AND tr.object_id IN ($object_ids) ORDER BY $orderby $order";
 
 	if ( 'all' == $fields || 'all_with_object_id' == $fields ) {
-		$terms = $wpdb->get_results($query);
+		$terms = array_merge($terms, $wpdb->get_results($query));
 		update_term_cache($terms);
 	} else if ( 'ids' == $fields || 'names' == $fields ) {
-		$terms = $wpdb->get_col($query);
+		$terms = array_merge($terms, $wpdb->get_col($query));
 	} else if ( 'tt_ids' == $fields ) {
 		$terms = $wpdb->get_col("SELECT tr.term_taxonomy_id FROM $wpdb->term_relationships AS tr INNER JOIN $wpdb->term_taxonomy AS tt ON tr.term_taxonomy_id = tt.term_taxonomy_id WHERE tr.object_id IN ($object_ids) AND tt.taxonomy IN ($taxonomies) ORDER BY tr.term_taxonomy_id $order");
 	}
@@ -1899,4 +1930,99 @@
 	}
 }
 
+/**
+ * get_term_link() - Generates a permalink for a taxonomy term archive
+ *
+ * @param object|int|string $term
+ * @param string $taxonomy
+ * @return string HTML link to taxonomy term archive
+ */
+function get_term_link( $term, $taxonomy ) {
+	global $wp_rewrite;
+
+	$termlink = $wp_rewrite->get_extra_permastruct($taxonomy);
+
+	if ( !is_object($term) ) {
+		if ( is_int($term) ) {
+			$term = &get_term($term, $taxonomy);
+		} else {
+			$term = &get_term_by('slug', $term, $taxonomy);
+		}
+	}
+	if ( is_wp_error( $term ) )
+		return $term;
+
+	$slug = $term->slug;
+
+	if ( empty($termlink) ) {
+		$file = get_option('home') . '/';
+		$t = get_taxonomy($taxonomy);
+		if ( $t->query_var )
+			$termlink = "$file?$t->query_var=$slug";
+		else
+			$termlink = "$file?taxonomy=$taxonomy&term=$slug";
+	} else {
+		$termlink = str_replace("%$taxonomy%", $slug, $termlink);
+		$termlink = get_option('home') . user_trailingslashit($termlink, 'category');
+	}
+	return apply_filters('term_link', $termlink, $term, $taxonomy);
+}
+
+function the_taxonomies($args = array()) {
+	$defaults = array(
+		'post' => 0,
+		'before' => '',
+		'sep' => ' ',
+		'after' => '',
+	);
+
+	$r = wp_parse_args( $args, $defaults );
+	extract( $r, EXTR_SKIP );
+
+	echo $before . join($sep, get_the_taxonomies($post)) . $after;
+}
+
+function get_the_taxonomies($post = 0) {
+	if ( is_int($post) )
+		$post =& get_post($post);
+	elseif ( !is_object($post) )
+		$post =& $GLOBALS['post'];
+
+	$taxonomies = array();
+
+	if ( !$post )
+		return $taxonomies;
+
+	$_template = '%s: %l.';
+
+	foreach ( get_object_taxonomies($post) as $taxonomy ) {
+		$t = (array) get_taxonomy($taxonomy);
+		if ( empty($t['label']) )
+			$t['label'] = $taxonomy;
+		if ( empty($t['args']) )
+			$t['args'] = array();
+		if ( empty($t['template']) )
+			$t['template'] = $_template;
+
+		$terms = get_object_term_cache($post->ID, $taxonomy);
+		if ( empty($terms) )
+			$terms = wp_get_object_terms($post->ID, $taxonomy, $t['args']);
+
+		$links = array();
+
+		foreach ( $terms as $term )
+			$links[] = "<a href='" . attribute_escape(get_term_link($term, $taxonomy)) . "'>$term->name</a>";
+
+		if ( $links )
+			$taxonomies[$taxonomy] = wp_sprintf($t['template'], $t['label'], $links, $terms);
+	}
+	return $taxonomies;
+}
+
+function get_post_taxonomies($post = 0) {
+	$post =& get_post($post);
+
+	return get_object_taxonomies($post);
+}
+
 ?>
Index: wp-includes/media.php
===================================================================
--- wp-includes/media.php	(revision 7519)
+++ wp-includes/media.php	(working copy)
@@ -438,4 +438,35 @@
 		echo wp_get_attachment_link($attachments[$k]->ID, 'thumbnail', true);
 }
 
+function get_attachment_taxonomies($attachment) {
+	if ( is_int( $attachment ) )
+		$attachment = get_post($attachment);
+	else if ( is_array($attachment) )
+		$attachment = (object) $attachment;
+
+	if ( ! is_object($attachment) )
+		return array();
+
+	$filename = basename($attachment->guid);
+
+	$objects = array('attachment');
+
+	if ( false !== strpos($filename, '.') )
+		$objects[] = 'attachment:' . substr($filename, strrpos($filename, '.') + 1);
+	if ( !empty($attachment->post_mime_type) ) {
+		$objects[] = 'attachment:' . $attachment->post_mime_type;
+		if ( false !== strpos($attachment->post_mime_type, '/') )
+			foreach ( explode('/', $attachment->post_mime_type) as $token )
+				if ( !empty($token) )
+					$objects[] = "attachment:$token";
+	}
+
+	$taxonomies = array();
+	foreach ( $objects as $object )
+		if ( $taxes = get_object_taxonomies($object) )
+			$taxonomies = array_merge($taxonomies, $taxes);
+
+	return array_unique($taxonomies);
+}
+
 ?>
Index: wp-includes/query.php
===================================================================
--- wp-includes/query.php	(revision 7519)
+++ wp-includes/query.php	(working copy)
@@ -680,6 +680,12 @@
 
 			if ( empty($qv['taxonomy']) || empty($qv['term']) ) {
 				$this->is_tax = false;
+				foreach ( $GLOBALS['wp_taxonomies'] as $t ) {
+					if ( isset($t->query_var) && '' != $qv[$t->query_var] ) {
+						$this->is_tax = true;
+						break;
+					}
+				}
 			} else {
 				$this->is_tax = true;
 			}
@@ -1146,19 +1152,34 @@
 
 		// Taxonomies
 		if ( $this->is_tax ) {
-			$terms = get_terms($q['taxonomy'], array('slug'=>$q['term']));
-			foreach ( $terms as $term )
-				$term_ids[] = $term->term_id;
-			$post_ids = get_objects_in_term($term_ids, $q['taxonomy']);
-
-			if ( count($post_ids) ) {
-				$whichcat .= " AND $wpdb->posts.ID IN (" . implode(', ', $post_ids) . ") ";
-				$post_type = 'any';
-				$q['post_status'] = 'publish';
-				$post_status_join = true;
+			if ( '' != $q['taxonomy'] ) {
+				$taxonomy = $q['taxonomy'];
+				$tt[$taxonomy] = $q['term'];
+				$terms = get_terms($q['taxonomy'], array('slug'=>$q['term']));
 			} else {
-				$whichcat = " AND 0 = 1";
+				foreach ( $GLOBALS['wp_taxonomies'] as $taxonomy => $t ) {
+					if ( isset($t->query_var) && '' != $q[$t->query_var] ) {
+						$terms = get_terms($taxonomy, array('slug'=>$q[$t->query_var]));
+						if ( !is_wp_error($terms) )
+							break;
+					}
+				}
 			}
+			if ( is_wp_error($terms) || empty($terms) ) {
+				$whichcat = " AND 0 ";
+			} else {
+				foreach ( $terms as $term )
+					$term_ids[] = $term->term_id;
+				$post_ids = get_objects_in_term($term_ids, $taxonomy);
+				if ( !is_wp_error($post_ids) && count($post_ids) ) {
+					$whichcat .= " AND $wpdb->posts.ID IN (" . implode(', ', $post_ids) . ") ";
+					$post_type = 'any';
+					$q['post_status'] = 'publish';
+					$post_status_join = true;
+				} else {
+					$whichcat = " AND 0 ";
+				}
+			}
 		}
 
 		// Author/user stuff
@@ -1296,7 +1317,7 @@
 					$statuswheres[] = "(" . join( ' OR ', $p_status ) . ")";
 			}
 			if ( $post_status_join ) {
-				$join .= " INNER JOIN $wpdb->posts AS p2 ON ($wpdb->posts.post_parent = p2.ID) ";
+				$join .= " LEFT JOIN $wpdb->posts AS p2 ON ($wpdb->posts.post_parent = p2.ID) ";
 				foreach ( $statuswheres as $index => $statuswhere )
 					$statuswheres[$index] = "($statuswhere OR ($wpdb->posts.post_status = 'inherit' AND " . str_replace($wpdb->posts, 'p2', $statuswhere) . "))";
 			}
Index: wp-includes/formatting.php
===================================================================
--- wp-includes/formatting.php	(revision 7519)
+++ wp-includes/formatting.php	(working copy)
@@ -1376,7 +1376,7 @@
 	$args = (array) $args;
 	$result = array_shift($args);
 	if ( count($args) == 1 )
-		$result .= $l['between_two'] . array_shift($args);
+		$result .= $l['between_only_two'] . array_shift($args);
 	// Loop when more than two args
 	while ( count($args) ) {
 		$arg = array_shift($args);
Index: wp-includes/rewrite.php
===================================================================
--- wp-includes/rewrite.php	(revision 7519)
+++ wp-includes/rewrite.php	(working copy)
@@ -461,6 +461,12 @@
 		return $this->tag_structure;
 	}
 
+	function get_extra_permastruct($name) {
+		if ( isset($this->extra_permastructs[$name]) )
+			return $this->extra_permastructs[$name];
+		return false;
+	}
+
 	function get_author_permastruct() {
 		if (isset($this->author_structure)) {
 			return $this->author_structure;
@@ -832,15 +838,14 @@
 		$page_rewrite = apply_filters('page_rewrite_rules', $page_rewrite);
 
 		// Extra permastructs
-		$extra_rewrite = array();
 		foreach ( $this->extra_permastructs as $permastruct )
-			$extra_rewrite = array_merge($extra_rewrite, $this->generate_rewrite_rules($permastruct, EP_NONE));
+			$this->extra_rules_top = array_merge($this->extra_rules_top, $this->generate_rewrite_rules($permastruct, EP_NONE));
 
 		// Put them together.
 		if ( $this->use_verbose_page_rules )
-			$this->rules = array_merge($this->extra_rules_top, $robots_rewrite, $default_feeds, $page_rewrite, $root_rewrite, $comments_rewrite, $search_rewrite, $category_rewrite, $tag_rewrite, $author_rewrite, $date_rewrite, $post_rewrite, $extra_rewrite, $this->extra_rules);
+			$this->rules = array_merge($this->extra_rules_top, $robots_rewrite, $default_feeds, $page_rewrite, $root_rewrite, $comments_rewrite, $search_rewrite, $category_rewrite, $tag_rewrite, $author_rewrite, $date_rewrite, $post_rewrite, $this->extra_rules);
 		else
-			$this->rules = array_merge($this->extra_rules_top, $robots_rewrite, $default_feeds, $root_rewrite, $comments_rewrite, $search_rewrite, $category_rewrite, $tag_rewrite, $author_rewrite, $date_rewrite, $post_rewrite, $extra_rewrite, $page_rewrite, $this->extra_rules);
+			$this->rules = array_merge($this->extra_rules_top, $robots_rewrite, $default_feeds, $root_rewrite, $comments_rewrite, $search_rewrite, $category_rewrite, $tag_rewrite, $author_rewrite, $date_rewrite, $post_rewrite, $page_rewrite, $this->extra_rules);
 
 		do_action_ref_array('generate_rewrite_rules', array(&$this));
 		$this->rules = apply_filters('rewrite_rules_array', $this->rules);
@@ -954,10 +959,10 @@
 		$wp->add_query_var($name);
 	}
 
-	function add_permastruct($struct, $with_front = true) {
+	function add_permastruct($name, $struct, $with_front = true) {
 		if ( $with_front )
 			$struct = $this->front . $struct;
-		$this->extra_permastructs[] = $struct;
+		$this->extra_permastructs[$name] = $struct;
 	}
 
 	function flush_rules() {
Index: wp-includes/classes.php
===================================================================
--- wp-includes/classes.php	(revision 7519)
+++ wp-includes/classes.php	(working copy)
@@ -14,7 +14,8 @@
 	var $did_permalink = false;
 
 	function add_query_var($qv) {
-		$this->public_query_vars[] = $qv;
+		if ( !in_array($qv, $this->public_query_vars) )
+			$this->public_query_vars[] = $qv;
 	}
 
 	function set_query_var($key, $value) {
Index: wp-includes/category-template.php
===================================================================
--- wp-includes/category-template.php	(revision 7519)
+++ wp-includes/category-template.php	(working copy)
@@ -475,6 +475,18 @@
 }
 
 function get_the_tags( $id = 0 ) {
+	return apply_filters( 'get_the_tags', get_the_terms($id, 'post_tag') );
+}
+
+function get_the_tag_list( $before = '', $sep = '', $after = '' ) {
+	return apply_filters( 'the_tags', get_the_term_list(0, 'post_tag', $before, $sep, $after) );
+}
+
+function the_tags( $before = 'Tags: ', $sep = ', ', $after = '' ) {
+	return the_terms( 0, 'post_tag', $before, $sep, $after );
+}
+
+function get_the_terms( $id = 0, $taxonomy ) {
 	global $post;
 
  	$id = (int) $id;
@@ -485,41 +497,39 @@
 	if ( !$id )
 		$id = (int) $post->ID;
 
-	$tags = get_object_term_cache($id, 'post_tag');
-	if ( false === $tags )
-		$tags = wp_get_object_terms($id, 'post_tag');
+	$terms = get_object_term_cache($id, $taxonomy);
+	if ( false === $terms )
+		$terms = wp_get_object_terms($id, $taxonomy);
 
-	$tags = apply_filters( 'get_the_tags', $tags );
-	if ( empty( $tags ) )
+	if ( empty( $terms ) )
 		return false;
-	return $tags;
+
+	return $terms;
 }
 
-function get_the_tag_list( $before = '', $sep = '', $after = '' ) {
-	$tags = get_the_tags();
+function get_the_term_list( $id = 0, $taxonomy, $before = '', $sep = '', $after = '' ) {
+	$terms = get_the_terms($id, $taxonomy);
 
-	if ( empty( $tags ) )
+	if ( is_wp_error($terms) )
+		return $terms;
+
+	if ( empty( $terms ) )
 		return false;
 
-	$tag_list = $before;
-	foreach ( $tags as $tag ) {
-		$link = get_tag_link($tag->term_id);
+	foreach ( $terms as $term ) {
+		$link = get_term_link($term, $taxonomy);
 		if ( is_wp_error( $link ) )
 			return $link;
-		$tag_links[] = '<a href="' . $link . '" rel="tag">' . $tag->name . '</a>';
+		$term_links[] = '<a href="' . $link . '" rel="tag">' . $term->name . '</a>';
 	}
 
-	$tag_links = join( $sep, $tag_links );
-	$tag_links = apply_filters( 'the_tags', $tag_links );
-	$tag_list .= $tag_links;
+	$term_links = apply_filters( "term_links-$taxonomy", $term_links );
 
-	$tag_list .= $after;
-
-	return $tag_list;
+	return $before . join($sep, $term_links) . $after;
 }
 
-function the_tags( $before = 'Tags: ', $sep = ', ', $after = '' ) {
-	$return = get_the_tag_list($before, $sep, $after);
+function the_terms( $id, $taxonomy, $before = '', $sep = '', $after = '' ) {
+	$return = get_the_term_list($id, $taxonomy, $before, $sep, $after);
 	if ( is_wp_error( $return ) )
 		return false;
 	else
Index: wp-content/themes/default/image.php
===================================================================
--- wp-content/themes/default/image.php	(revision 7519)
+++ wp-content/themes/default/image.php	(working copy)
@@ -23,6 +23,7 @@
 					<small>
 						This entry was posted on <?php the_time('l, F jS, Y') ?> at <?php the_time() ?>
 						and is filed under <?php the_category(', ') ?>.
+						<?php the_taxonomies(); ?>
 						You can follow any responses to this entry through the <?php post_comments_feed_link('RSS 2.0'); ?> feed.
 
 						<?php if (('open' == $post-> comment_status) && ('open' == $post->ping_status)) {
Index: wp-admin/includes/media.php
===================================================================
--- wp-admin/includes/media.php	(revision 7519)
+++ wp-admin/includes/media.php	(working copy)
@@ -426,37 +426,6 @@
 	return wp_iframe( 'media_upload_library_form', $errors );
 }
 
-function get_attachment_taxonomies($attachment) {
-	if ( is_int( $attachment ) )
-		$attachment = get_post($attachment);
-	else if ( is_array($attachment) )
-		$attachment = (object) $attachment;
-
-	if ( ! is_object($attachment) )
-		return array();
-
-	$filename = basename($attachment->guid);
-
-	$objects = array('attachment');
-
-	if ( false !== strpos($filename, '.') )
-		$objects[] = 'attachment:' . substr($filename, strrpos($filename, '.') + 1);
-	if ( !empty($attachment->post_mime_type) ) {
-		$objects[] = 'attachment:' . $attachment->post_mime_type;
-		if ( false !== strpos($attachment->post_mime_type, '/') )
-			foreach ( explode('/', $attachment->post_mime_type) as $token )
-				if ( !empty($token) )
-					$objects[] = "attachment:$token";
-	}
-
-	$taxonomies = array();
-	foreach ( $objects as $object )
-		if ( $taxes = get_object_taxonomies($object) )
-			$taxonomies = array_merge($taxonomies, $taxes);
-
-	return array_unique($taxonomies);
-}
-
 function image_attachment_fields_to_edit($form_fields, $post) {
 	if ( substr($post->post_mime_type, 0, 5) == 'image' ) {
 		$form_fields['post_title']['required'] = true;

